CDS

Accession Number TCMCG081C30751
gbkey CDS
Protein Id XP_002264670.1
Location complement(join(12183938..12184255,12186548..12186748,12186852..12187223))
Gene LOC100245024
GeneID 100245024
Organism Vitis vinifera

Protein

Length 296aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002264634.4
Definition PREDICTED: cold shock protein 1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category O
Description Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09250        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016605        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGAGCCAGACGACGCCGTTTTGGTGGTTGAAGATGAAGATTTCCTGAGCGCCGTGGCAGCAGTGGAGGCCAATGCTCTGTCGAACAAGCGGCGCAGGACCTACACCTCCGACGCTGCAAAAGAAGGCATCTACACTGCCGCTCTCAGAGGGAGCAACAGTCTGGCGTGGAAGCAGAGCGCCACCGCCGCATCCGGTGCTCCGAGCAGCAGAGGATCATCCTCTGTTTCTTCCTCCGGTAAATCGGACGGCGGAGATTCTTCCCCTCCCGAGAAGCCATGCCCCTGCGGATTGGGAACCTGTCTCATTCTCACTTCCAACACCCAGAAAAACCCGGGCCGCAAATTCTACAAATGTCCTCTCAGAGAGGAAAATGGGGGCTGTGGGTTCTTCCAGTGGTGTGACAATTCTTCTGGAATTAGTAACGATGCTTTTGGGGCTATAAATCCTGGATTGAACTCTTCATTCCCTGACCTTAAATGTCCCTGTGGTGCTGGTTCTTGCCTGATTCTAACTGCAAAAACCGGTAATAATGCCGGGCAGCAGTTCTACCGCTGCCCTGCTAACCAGGGAGGTTCTTGTGGGTTTTTCAAATGGTGCAATGATCAAACTGTACCAGCTGGGCTCCCAGTTGGTGCTTCGAGGGGTTATAACACCACCACCAATGCAAGCATCAAAAGCTATGGGGCACAAAGTGGTTCTTCCTGTTTCAAATGTGGCAAGGAAGGGCATTGGGCAAAAGATTGCCAGATGCCTTCACCCGAACCCCTTGCTGATTCGGGAGGGAGGCCTGCTTCATCAGGTACCTGTTATAAGTGTGGTAAGCCTGGTCACTGGGCAAGAGACTGCTCTTCTAGTCAAGATACAAAAGTATGGCAGAGACGGTAA
Protein:  
MVEPDDAVLVVEDEDFLSAVAAVEANALSNKRRRTYTSDAAKEGIYTAALRGSNSLAWKQSATAASGAPSSRGSSSVSSSGKSDGGDSSPPEKPCPCGLGTCLILTSNTQKNPGRKFYKCPLREENGGCGFFQWCDNSSGISNDAFGAINPGLNSSFPDLKCPCGAGSCLILTAKTGNNAGQQFYRCPANQGGSCGFFKWCNDQTVPAGLPVGASRGYNTTTNASIKSYGAQSGSSCFKCGKEGHWAKDCQMPSPEPLADSGGRPASSGTCYKCGKPGHWARDCSSSQDTKVWQRR